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The following is a conversation with Professor Jack Gilbert, a professor at the University of California, San Diego, along with his many other very interesting titles and job roles. This includes the co-founder of the Earth Microbiome Project, the American Gut Project, and also featured in the very popular recent Netflix documentary, Hack Your Health. He is a master of the microbiome. We covered all aspects of the microbiome, the ocean, the soil, how it could impact climate change, and gut health, responses to drugs. 00:00:00 Intro 00:03:19 Human Microbiome Project 00:09:29 Carnivore diet 00:12:49 Impact of the microbiome 00:24:09 Hack Your Health 00:27:40 MOA & biological signals 00:33:42 Understanding the microbial system 00:42:20 Solution in a pill? 00:46:52 Leaving England 00:54:48 Research technology 00:59:30 GutLab 01:04:22 What does the future hold? 01:06:40 Importance of microbiome diversity 01:08:13 Kumeyaay tribe 01:12:05 Ocean acidification 01:19:42 AI 01:26:59 Immune system and morphology
Gut microbiome influences many facets of the body. From depression to diabetes, a healthy gut is essential for both physical and mental health. In this episode, Dr. Jack A. Gilbert joins us to discuss how microbes interact with each other, the world around them, and what makes them a vital part of our health and wellness. Dr. Gilbert is the Director of the Microbiome and Metagenomics Center and the Microbiome Core Facility and a Professor at UC San Diego School of Medicine. He also serves on the board of the Genomic Standards Consortium, and is the primary investigator for various research ventures – including the Earth Microbiome Project, the Home Microbiome Project, the Gulf Microbial Modeling Project, the Hospital Microbiome Project, and the Chicago River Microbiome Project. As the author of more than 400 peer-reviewed publications and book chapters, Dr. Gilbert is an internationally recognized expert in medical and environmental microbiology, microbial ecology, and biotechnology development. Are you ready to dive into the fascinating world of gut health? You've come to the right place! Join in to explore: The impact of fasting on gut bacteria. The metabolic benefits of intermittent fasting. Types of bacteria that cause infections in the body. You can find more information on Dr. Gilbert and his work here! Take advantage of a 5% discount on Ekster accessories by using the code FINDINGGENIUS. Enhance your style and functionality with premium accessories. Visit bit.ly/3uiVX9R to explore latest collection. Episode also available on Apple Podcasts: http://apple.co/30PvU9
Gut microbiome influences many facets of the body. From depression to diabetes, a healthy gut is essential for both physical and mental health. In this episode, Dr. Jack A. Gilbert joins us to discuss how microbes interact with each other, the world around them, and what makes them a vital part of our health and wellness. Dr. Gilbert is the Director of the Microbiome and Metagenomics Center and the Microbiome Core Facility and a Professor at UC San Diego School of Medicine. He also serves on the board of the Genomic Standards Consortium, and is the primary investigator for various research ventures – including the Earth Microbiome Project, the Home Microbiome Project, the Gulf Microbial Modeling Project, the Hospital Microbiome Project, and the Chicago River Microbiome Project. As the author of more than 400 peer-reviewed publications and book chapters, Dr. Gilbert is an internationally recognized expert in medical and environmental microbiology, microbial ecology, and biotechnology development. Are you ready to dive into the fascinating world of gut health? You've come to the right place! Join in to explore: The impact of fasting on gut bacteria. The metabolic benefits of intermittent fasting. Types of bacteria that cause infections in the body. You can find more information on Dr. Gilbert and his work here! Take advantage of a 5% discount on Ekster accessories by using the code FINDINGGENIUS. Enhance your style and functionality with premium accessories. Visit bit.ly/3uiVX9R to explore latest collection. Episode also available on Apple Podcasts: http://apple.co/30PvU9
In this episode I have an interview with a leading scientist specializing in gut microbiota. These are the microbes that live in your intestine and help you digest your food. Our DNA does not have all the enzymes we need to break down food into the vitamins and minerals we need. We live in a symbiotic relationship with this microbial ecosystem. We provide the microbes a home and they provide us with nutrients. When the ecosystem gets out of whack we can get sick. Sometimes we take anti-biotics to cure an infection and that throws a huge wrench into this ecosystem. I've seen a lot of folks saying probiotics help to build a robust microbiome, and I've also heard a lot of folks saying that anything you eat gets killed in the stomach. I'd like to hear what the experts have to say. Professor Jack Gilbert joined UCSD in 2019 where he is a Professor in Pediatrics and the Scripps Institution of Oceanography, Associate Vice Chancellor for Marine Science, and Director of both the Microbiome and Metagenomics Center and the Microbiome Core Facility. He uses molecular analysis to test fundamental hypotheses in microbial ecology. He cofounded the Earth Microbiome Project and American Gut Project, has authored over 400 peer reviewed publications and book chapters on microbial ecology, co-authored the book “Dirt is Good,” and is the founding Editor in Chief of ASM mSystems journal. He founded BiomeSense Inc to produce automated microbiome sensors. Support the podcast at patron.podbean.com/TheRationalView Add your two cents on Facebook @TheRationalView Twitter @AlScottRational Instagram @The_Rational_View #TheRationalView #podcast #microbiome #gut #probiotics #health #nutrition
Professor Jack Gilbert is a global leader in microbiome research, co-founding both the Earth Microbiome Project and American Gut Project. He has authored more than 300 peer-reviewed publications and book chapters on ecosystem ecology and is the founding editor-in-chief of mSystems, a journal of the American Society of Microbiology. In this weeks episode of the Gutology podcast - Jack discusses his research into Gut Health, Mood & depression. Struggling with Gut health issues? Head to www.gutology.co.uk
The gut and microbiome is increasingly being referred to as your “second brain,” with fascinating new research linking the microbiome to everything from behavior to skin health. In this episode, Shazi speaks with Dr. Jack Gilbert, Professor in Pediatrics at UCSD and Co-Founder of The Earth Microbiome Project and The American Gut Project, about the development of a baby's microbiome and what parents can do ensure that their baby's gut and microbiome is as diverse and healthy as possible, from breastfeeding to beneficial probiotics. He also explains what he's learned about the link between gut health and behavior, from both his research and his personal experience raising his son, who was diagnosed with autism. Shazi also shares what she's learned from her own experience with Zane – and what she's learned about the link between the gut and his behavior. We also hear from Michelle Eggers and Leila Strickland, Co-Founders of BIOMILQ – and their work to create breast milk without the breast, to ensure that future generations of babies are better fed. See omnystudio.com/listener for privacy information.
Prebiotics and probiotics. Fecal microbiota transplants. Optimizing a diet personalized to you. These microbiome-themed topics are all around us in the media, but microbiome research remains a fairly nascent field of study and wasn't on many people's radars even 10 years ago. UCSD Professor Dr. Jack Gilbert and Institute for Systems Biology (ISB) Assistant Professor Dr. Sean Gibbons came together to tackle this exciting area of research. What have we learned over the past few years? What has gone well, and what could we do better? The two discussed some exciting developments on the horizon and share when they think people might see microbiome-based technologies in their daily lives. Dr. Jack A. Gilbert is a Professor of Microbial Oceanography in the Center for Marine Biotechnology and Biomedicine at Scripps Institute of Oceanography, and holds a joint appointment in the Department of Pediatrics in UCSD School of Medicine. Dr. Gilbert is also cofounder of the Earth Microbiome Project and American Gut Project, has authored more than 350 peer-reviewed publications and book chapters on microbial ecology, and is the founding Editor in Chief of mSystems journal. He has been recognized on Crain's Business Chicago's “40 Under 40 List,” listed as one of the 50 most influential scientists by Business Insider, and was named as one of the “Brilliant Ten” by Popular Scientist. He is the co-author of Dirt is Good, a popular science guide to the microbiome and children's health. Dr. Sean Gibbons is Assistant Professor at ISB. He holds a Ph.D. in biophysical sciences from the University of Chicago; his graduate work focused on using microbial communities as empirical models for testing ecological theory. Gibbons completed his postdoctoral training in Eric Alm's laboratory in the Department of Biological Engineering at MIT, where his work focused on developing techniques to quantify individual-specific eco-evolutionary dynamics within the human gut microbiome. He is particularly interested in learning how organisms in the human gut change and adapt to individual people over their lifespans, and how those changes impact health. Presented by the Institute for Systems Biology and Town Hall Seattle.
Link to bioRxiv paper: http://biorxiv.org/cgi/content/short/2020.10.06.327080v1?rss=1 Authors: Cantrell, K., Fedarko, M. W., Rahman, G., McDonald, D., Yang, Y., Zaw, T., Gonzalez, A., Janssen, S., Estaki, M., Haiminen, N., Beck, K. L., Zhu, Q., Sayyari, E., Morton, J., Tripathi, A., Gauglitz, J. M., Marotz, C., Matteson, N. L., martino, c., Sanders, J. G., Carrieri, A. P., Song, S. J., Swafford, A. D., Dorrestein, P., Andersen, K. G., PARIDA, L., Kim, H.-C., Vazquez-Baeza, Y., Knight, R. Abstract: Standard workflows for analyzing microbiomes often include the creation and curation of phylogenetic trees. Here we present EMPress, an interactive tool for visualizing trees in the context of microbiome, metabolome, etc. community data scalable beyond modern large datasets like the Earth Microbiome Project. EMPress provides novel functionality-including ordination integration and animations-alongside many standard tree visualization features, and thus simplifies exploratory analyses of many forms of -omic data. Copy rights belong to original authors. Visit the link for more info
Probiotics and prebiotics are all the rage in skincare, but do these buzzwords actually mean anything? What is the microbiome? And what does it have to do with the fight against aging? To find out, Sandy and Chan interviewed Dr. Jack Gilbert (@gilbertjacka), microbial ecologist at the University of California (San Diego) and co-author of Dirt is Good: The Advantage of Germs for Your Child’s Developing Immune System. But before we get to Jack, let’s talk about Sandy’s latest challenge! Chan sent her to Hoame in Toronto, to its salt cave. Interested in learning more? Check it out at hoame.ca. Now for the microbiome! Learn more about Dr. Jack A. Gilbert: His book is Dirt is Good. He’s a professor at UCSD in Pediatrics and the Scripps Institution of Oceanography. Here’s his academic profile. He cofounded the Earth Microbiome Project and the American Gut Project. He’s on Twitter @gilbertjacka Go deep on the microbiome: New Insights into the Intrinsic and Extrinsic Factors That Shape the Human Skin Microbiome New York Times story on a microbial therapy for eczema pioneered by one of Dr. Gilbert’s colleagues: The Solution for Skin Ailments Could Be Right Under Your Nose Plus the research paper that inspired the NY Times article More about the relationship between bifidobacterium longum infantis and sticky baby diapers: Bifidobacterium longum subsp infantis CECT7210-supplemented formula reduces diarrhea in healthy infants: a randomized controlled trial More about the relationship between acne and the microbiome: Potential Role of the Microbiome in Acne: A Comprehensive Review Don’t forget to subscribe and rate us on your favourite podcast app! Visit our website at beyondsoappodcast.com. Have a question for us? Send it to beyondsoappodcast@gmail.com. And check out our Facebook group by searching on Facebook for “Beyond Soap podcast.” Follow us on Instagram: @DrSandySkotnicki — @ChantelGuertin — @BeyondSoapPodcast
Jack Gilbert talks about his studies on microbiomes of all sorts. He describes the origin of the Earth Microbiome Project, which has ambitions to characterize all microbial life on the planet, and talks more specifically about the built microbiome of manmade ecosystems such as hospitals. Gilbert explains how advances in scientific techniques have driven past microbiome-related discoveries and will continue to do so in the future. Host: Julie Wolf Subscribe (free) on iPhone, Android, RSS, or by email. You can also listen on your mobile device with the ASM Podcast app. Julie's biggest takeaways: Insect-pathogenic fungi living in plant roots can pass nitrogen from killed insects to their plant hosts, receiving different carbon nutrients from the plants in return. Fungi harvested after growth on inexpensive materials like chicken droppings are used in agriculture both as fertilizer and as insecticide. Cyclosporine was first discovered in insect-pathogenic fungi. Raymond St. Leger and other scientists working to introduce genetically modified microbes into the environment deeply consider the societal effects of their work, including collaboration with local communities, governmental regulatory bodies, and trusted leaders and tailor their efforts to the regional area. Featured Quotes (in order of appearance): “We really can apply ecological understanding of microbiomes and microbial ecosystems to any environment.” “I think basic research is absolutely essential but I always want to think about what that could lead to in the future.” “Reproducibility is key and extraordinarily difficult in all fields of science due to lack of appropriate funding and a zeitgeist in science that discourages scientists from reproducing one another’s studies.” “We are forever striving to validate the predictions we derive from our descriptive work. We create SO MANY predictions!” “No small dreams, no small goals - go big or go home! At the end of the day, we all want to feel like we’re doing something that makes an impact.” “I love to collaborate. I love to work with other people, brilliant people in the microbiome field” “I’m often accused of not being focused enough. What does Jack Gilbert do? Well, I do a little bit of everything - as long as there’s a microbe involved! I like it like that; it keeps me energized.” Links for this episode Jack Gilbert website at University of Chicago Jack Gilbert TedxNaperville Talk Earth Microbiome Project home page Dirt is Good - new book by Gilbert and Rob Knight History of Microbiology Tidbit: Joshua Lederberg piece in The Scientist on ‘microbiome’ nomenclature in 2001. Send your stories about our guests and your comments (email or recorded audio) to jwolf@asmusa.org.
If you experience any technical difficulties with this video or would like to make an accessibility-related request, please send a message to digicomm@uchicago.edu. Dr. Gilbert is a microbial ecologist whose ongoing research is focused on exploring how microbial communities assemble themselves in natural and human-made environments. He currently manages the Earth Microbiome Project, which is an ongoing effort to characterize the microbial diversity of our planet, The Home Microbiome Project exploring how humans interact with the bacteria living in their homes; and the Hospital Microbiome Project, examining how adding patients and staff into a hospital building effects the development of microbial communities and important pathogens. Wednesday Lunch is a Divinity School tradition started many decades ago. At noon on Wednesdays when the quarter is in session a delicious vegetarian meal is made in the Swift Hall kitchen by our student chefs and lunch crew. Once the three-course meal has reached dessert each week there is a talk by a faculty member or student from throughout the University, a community member from the greater Chicago area, or a guest from a wider distance. Lunch topics have addressed everything from the parakeets of Hyde Park to the world of male modeling to language loss in Siberia, presented over an always-delicious meal, cooked and served that day by our creative and energetic student staff. Sit at any table and join the conversation: the programs provide a unique opportunity for students, staff, and faculty to engage one another.
If you experience any technical difficulties with this video or would like to make an accessibility-related request, please send a message to digicomm@uchicago.edu. Dr. Gilbert is a microbial ecologist whose ongoing research is focused on exploring how microbial communities assemble themselves in natural and human-made environments. He currently manages the Earth Microbiome Project, which is an ongoing effort to characterize the microbial diversity of our planet, The Home Microbiome Project exploring how humans interact with the bacteria living in their homes; and the Hospital Microbiome Project, examining how adding patients and staff into a hospital building effects the development of microbial communities and important pathogens. Wednesday Lunch is a Divinity School tradition started many decades ago. At noon on Wednesdays when the quarter is in session a delicious vegetarian meal is made in the Swift Hall kitchen by our student chefs and lunch crew. Once the three-course meal has reached dessert each week there is a talk by a faculty member or student from throughout the University, a community member from the greater Chicago area, or a guest from a wider distance. Lunch topics have addressed everything from the parakeets of Hyde Park to the world of male modeling to language loss in Siberia, presented over an always-delicious meal, cooked and served that day by our creative and energetic student staff. Sit at any table and join the conversation: the programs provide a unique opportunity for students, staff, and faculty to engage one another.
Bacteria are everywhere. How do you study the microbiome? On this episode, microbial ecologist Jack Gilbert discussed the Earth Microbiome Project.