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Curious about the cosmos? Intrigued by evolution? Two scientists put their heads together to help answer your questions. You can show your love for science by supporting us on patreon.com/2scientists

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    • Jul 25, 2024 LATEST EPISODE
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    Latest episodes from 2Scientists

    Neobe and the cancer matrix

    Play Episode Listen Later Jul 25, 2024 56:27


    Using bacteria to treat a disease like cancer may not seem very intuitive, but there are very smart reasons for doing so. No one knows this better than Dr. Pedro Correa de Sampaio, co-founder of Neobe, a company doing just that. No, the name isn't a reference to the Matrix movies (for those of us old enough to remember them). It's derived from “neo” as in new and “obe” as in the end of microbe, which makes perfect sense since they synthesize bacteria from scratch. We also talked to Pedro about traveling as a scientist, setting up his own biotech company and the need for science communication. Keep up with Pedro's work and advances on Linkedin and check out the website for Neobe. We're very much enjoying listening to Afonso Cabral's album Morada, which you too can download from Bandcamp, or check out his website for more info about his music.

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    Brains, drones and smart apps for our phones

    Play Episode Listen Later Dec 23, 2023 36:27


    Have you ever just though how easy it would be to control everything with your brain? Poof, the lights go on, and Netflix just chooses your favorite show. Beyond these niceties though, Dr. Marvin Andujar has bigger and better plans. Working as a computer scientist at the University of South Florida, Marvin is developing brain-computer interfaces to do fun things like fly drones. But also with more practical applications like helping those with ADHD, dementia and anyone looking to improve their mental health. Join us to learn more about what we can do with the power of our minds.

    This time it's personal...

    Play Episode Listen Later Jul 14, 2023 9:56


    It may feel like 2Scientists has dropped off the face of the planet since our last release, so we wanted to check in and let you all know where we're at.

    The pharmacovigilante

    Play Episode Listen Later Dec 13, 2022 66:23


    He's here, he's there; Dr. Hillman brings drug safety everywhere! So given the rules and regulations he needs to follow, the title “vigilante” could be nothing but ironic.We chart David's progress through choosing pharmacology as a subject to study, and settling on pharmacovigilance as a career to pursue. Listen: The Bollywood beats come courtesy of Cambridge-based artist Anish Kumar whose music you can also find on Bandcamp: anishkumarmusic.bandcamp.com, YouTube, Instagram and Twitter.Watch:Subscribe to our YouTube channel now for all future recordings. Episode transcript[Background intro music playing is "Nazia" by Anish Kumar]Parmvir: Hello everyone. And welcome to another episode of the 2Scientists podcast, where inspiring scientists share their work with you, wherever you like to listen. Today we come to you from a rather unique spot, rather than a cafe or bar we are camped out in Kensington Gardens in London, because it's a glorious day and our podcasting equipment allows us to do that. But enough about me and us, we are here today, of course I am your host Parmvir Bahia here and we're here with David Basanta, but we also have with us another David who is very special to me, he is an old friend of mine from my PhD program, and we shared much time and much swearing over experiments together at University college London. How are you David Hillman? David: I'm doing well. Thank you. It's, as you say, it's a, it's a lovely day and, it's nice to be back with old friends. Parmvir: Yes, yes. Of course everything rotates background to COVID and whereas we would normally see each other once a year. It's been three, four, possibly? David: Three, I think that's yeah.Parmvir: Miserable. David: Yeah. Sad times we shall have to make up for it. Parmvir: We will, we will. There's a bottle of Cava with our name on it. Once we've done with this. David: And onion rings. Parmvir: And onion rings. Yes. Fancy Marks and Spencer's one's though. So let's start at the beginning. I'm not talking about like, where were you born kind of thing. Although you can mention Kidderminster if you'd like. So as I understand it, we had a relatively similar track as undergraduates. So you did a bachelor's in pharmacology, correct? David: Yeah, that's right. Parmvir: So tell us why, why pharmacology? David: So this is gonna age me, age us.So I, for my A levels, so for my senior school exams, I, studied chemistry, biology, and maths, and I wanted to study something at university that combined chemistry and biology. And so this is the bit that will age us. So back in the day, if you remember, you would go to the, career advice department who were trying to help people to steer people towards what options they might want to pick at university.And they had this huge telephone directory effectively, which, mapped together people's different, combinations of A level courses and then gave you a list of options that you could, study at university. So I was sat in this little tiny room with this career advisor person, and they were basically running through this list of different courses.And when they came to pharmacology, they'd already mentioned pharmacy, which, you know, most people know what it is, but then they said pharmacology and I stopped them and said, well, what's, what's the difference? And they actually gave a pretty good summary. They said, it's more the biology of medicine. It's more the, the research and development of new medicines. They said it's potentially a controversial topic because it's the pharmaceutical industry is itself sometimes controversial and there's other aspects to the industry, which are, challenging sometimes. But yeah, that's how it started. So I picked a few different pharmacology courses, one of which was King's College London. I was always very practical, so I liked the idea of doing a year in industry at some point. So I chose a sandwich course like you and yeah, so that took me to KCL all that time ago. Parmvir: Mm. So I didn't realize how similar our tracks had been, because I also did biology, chemistry and maths, and I wanted to do something with the chemistry and the biology.And I got put in that direction by David: did you pick it out of the phone book as well? Parmvir: I did. What was it called? There was a name for it. David: It was pretty like a UCAS publication. Parmvir: Yes. It was just, it was enormous. David: Yeah. Parmvir: But yeah, in any case, I also, I did a sandwich year and I got to go and hang out in Germany for a year, which was fun.But yeah. So obviously after that you came to do a PhD at UCL where we were, well, I was a year ahead of you, I think. David: Yeah. You were. Parmvir: Why? Why did you do a PhD? David: So well for the reasons that I guess a lot of people do them, which is that I wasn't sure what to do next [both laugh] and a PhD seemed like a good way to string it out for another few years before I figured that out.But the reason I landed on UCL was that when I did go and do my year in industry, which like you was for a large pharma company, I worked in a lab looking at some non-clinical safety models. And we were using electrophysiology techniques at the time that was sharp electrode electrophysiology.Parmvir: You're gonna have to explain what electrophysiology means. David: Oh, don't make me do that. It's been 20 years [Parmvir laughs]. Oh, it's basically where you take either isolated cells or tissues and you put tiny, tiny electrodes into them and measure the changing currents across cell membranes. And as you put different drugs on, you can look at different effects of those drugs how they affect the electrical signals that you can measure.And really it's ions moving back and forward across membranes by little things called ion channels. So yeah, so I'd done sharp electrode electrophysiology there. I went back to university to finish my last year, and then the question came up about what to pick for a PhD. And I thought, well, although I hadn't enjoyed electrophysiology, it's something that I had started to, I guess, gain an interest in. Plus I had some skills that in that area. So, yeah, so I found a course, rather a PhD studentship at UCL, which seemed to fit the bill. It was looking at using a slightly different electrophysiology technique, so patch, clamping in a different area, but I thought it was something that I could use what I'd learnt in my year in industry Parmvir: I gave you some of these questions beforehand. David: Yes, because I'm incapable of spontaneous reaction to questions [Parmvir laughs]. Parmvir: Actually, I loved it so much that I have to read out your description of what your memory is like. David: I was quite proud of that. I coined that yesterday. I used to think of my memory as a lobster pot. Parmvir: All right. So you said I've just come up with a good analogy for my recall memory. It's like a reference library. You have to put in a request and then go away for a bit. When you come back, I'll have retrieved something from the vaults. Hopefully. David: Yeah, exactly. Parmvir: But aside from that I wanted to say this might be something of a loaded question, but what did you think of your PhD experience?David: You know, I really, I look back on those years with fond memory. Now it's partly because looking back, you edit out all of the stress and anxiety associated with doing a research project like that. I remember at the time when I first started UCL ran some induction courses where they pulled together PhD students and other postgraduate students from all sorts of backgrounds and John Foreman who you'll remember who was the Dean of students at the time, he gave a little introduction to UCL, but also gave some interesting advice let's say and pointers.And one of the things he pointed out in that session was the high degree of mental illness that is encountered by students in general taking these types of courses because they are stressful. And you often feel like you are kind of on your own. Driving your own research project forward. Sometimes through difficult times. So I do remember that in particular, but you know, what I remember mostly is just how impressed I was with all of the people that surrounded me because our department was not particularly flashy in its kind of presentation, but there were some seriously impressive people there.So I always like to think of our lab in the sense of, you know, it was run by effectively by Dennis and, and Guy when we got there. But before then it had been run by Don and before then it had been run by Bernard Katz who was a Nobel laureate. So it felt like we were the either grandchildren or great grandchildren of a Nobel Laureate and the whole department was a bit like that. It had a lot of very understated people who were world experts in their, in their field. And I always felt like the dumbest person in the department. But that didn't bother me too much because you know, being surrounded by all this greatness and even just, you know, the little glimpses of things you would see at the kind of coffee breaks and in the corridors, some of those memories still live with me, you know. Bearing in mind, this was back in what, between 2001 and 2005.So very, very early days of smartphones, things like trios and things like that, which seem antiquated now. But I remember coming across two old professors, so probably in their seventies or eighties comparing their smartphones and that like little microcosm, are the things that I loved about the department.Parmvir: Actually, I mean, I think you're, you're definitely selling yourself short. Like nobody would say that you weren't smart enough to be there. And I think one of the things that kind of ties into the, the mental health aspect is that we all felt that way. David: Yeah. Parmvir: Except we didn't express it to anyone else. It's, it's utterly ridiculous. How can we all be the least smart person in the room that's just not possible. David: Yeah. Parmvir: And after that, we all got our PhDs anyway, so, you know yeah. David: I certainly have no regrets about it. And I look back on those times with, with very fond memories, for sure. Parmvir: Yeah. Just talk briefly about what you did for your project and what the difficulties were.David: So the lab that I joined, so which, which you were a part of as well, their specialty was calcium activated potassium channels. And over time, the lab had looked at these ion channels in various different settings. The project that I was given was looking at these channels in vascular endothelial cells, which was a cell type that no one in the lab had ever studied before.Parmvir: Mm. David: So one of the biggest challenges that we were hit with straight away was that no one in the lab could really help that much with firsthand experience of how to obtain these cells, how to isolate them, how to culture them, how to grow them and really how to manage those cell types. So you might well remember that, the first, probably nine months of my PhD was just spent trying to culture these cells. Parmvir: Mm-hmm David: and it started with you know, available tissue from rats and other small mammals.But then eventually we were not having success with culturing cells from those models. So I switched onto pigs and, you know, I'd done a bit of reading that, you know, these vessels, because they were much larger the blood vessels, it was easier effectively to culture cells from, so I looked in the phone book and I found the address of an abattoir out in the middle of Essex.And there began my weekly trip for getting on for two and a half years to the deepest, darkest corners of Essex to go and retrieve pig, coronary artery cells once a week. Parmvir: Yeah. And essentially you suffered because these things were so flat. [David laughs] And when you're trying to, so you, for anyone who's listening, you have to picture trying to get a very, very fine tube onto something that is incredibly flat, and essentially you need this thing to form a vacuum seal and that just wasn't gonna happen. David: No, so, you know, vascular endothelial cells, they're the cells that line blood vessels, which is why they're, they're very flat. They're like tiles almost on the inside of veins and arteries.And you know, with other cells in the lab that were being looked at like the ones that you were looking at, like DRGs and like neurons and things like that, you know, you were basically putting the, the electrode down onto like a ball. Parmvir: Yeah. David: So the gap between the bottom of the dish and the top of the cell was who knows, 10, 20 microns, something like that. The cells that we were looking at, they flattened themselves out so much, they were about one micron, I think we estimated and therefore the tiniest vibration in the room would destroy the cell. And yeah, so the first stage was trying to culture, the damn things, and that was extremely challenging. It took a long time, but nine months of the way through managed it, and then began the whole pain of trying to get electrical recordings from them, which turned out to be as difficult. Parmvir: Yeah. So one of the things, I don't know if we ever talked about this, but what did you aspire to do after you'd done your PhD originally?Like, did you have any kind of idea? David: I mean, I think I was always headed into the pharmaceutical industry, which is where I landed up. In my undergrad degree in, I think my either first or second year, I did a very nice course, which was a kind of practical introduction to the pharmaceutical industry and from very top level, how drugs are developed and how pharma companies are organized internally and how the research progresses. And that, I'd always found that interesting. I mean, I find the entire pharmaceutical industry absolutely fascinating. And still do to this day. It's such an amazingly complex industry. And so, yeah, so I think I'd always been heading in that direction. Sure enough, the PhD certainly made me decide I was done with bench science [Parmvir laughs]. So, you know, by the time you've spent three plus years plodding along with these experiments that have a success rate of one in 50 sometimes. Parmvir: Yeah. David: You know, days and weeks without getting any data, and towards the end, still being in the lab at three o'clock in the morning, trying to get something to work and breaking more and more glassware as time goes on [Parmvir laughs]Yeah, I decided I was done with bench science, although I loved being in the labs, I loved playing in the labs. But I was never that into the kind of reading of the scientific papers and that sort of thing. Once it came down to maths and things like that, I wasn't so engaged. I needed to see practical things. Parmvir: Yeah. I feel like at some point we realized we were both some kind of engineer at heart rather than David: Yeah. Maybe Parmvir: scientist, David: maybe. Parmvir: It's more like, how does this work rather than trying to answer a bigger scientific question. David: Yeah. Parmvir: But obviously you were, you were a little bit scarred by your experience there, and you ended up going off in, I guess, a very different track from what the standard academic education leads you towards. So I think at this point this might be a good place to put your disclaimer in. David: Yes. So I work in the pharmaceutical industry and over time I've worked for, and with a variety of different companies.Any of the content that I describe today are my opinions and my opinions alone, and often they're really based off things which are in the public domain. In fact it's all based off things that were in the public domain and also some of the education that I've received, because actually, even after I finished my PhD, I then years later went on to study a, another academic course specifically in pharmacovigilance and pharmacoepidemiology.Parmvir: Oh, where did you do that? David: London school of Hygiene and Tropical Medicine. Parmvir: Oh. David: And it's interesting because it's a short course and I felt was a very valuable course. It's a course where regulatory authorities also send their people to learn too. Parmvir: So there's a lot of questions I can ask next.But one of the things that your job description throws up is this word "pharmacovigilance". What does that mean? David: Okay. So somewhere because I'm not gonna do it justice from memory, I'm going to read out the WHO definition of pharmacovigilance. It doesn't roll off the tongue, unfortunately, which is why it's never quite there in my head.So per the WHO: pharmacovigilance is the science and activities relating to the detection, assessment, understanding and prevention of adverse effects, or any other medicine, or vaccine-related problem. So essentially it is the process and the science relating to drug side effects. Now as you'll remember from pharmacology days, very early on, you're taught that all pharmacologically active substances, if it applies to the human body have side effects. The same side effects are not encountered by every person.And you know, some of the side effects might have obvious clinical manifestations. Some might not, you might get side effects, never know you've had them. And of course they vary massively in severity. So when you are looking at a medicine, particularly one that you're introducing to kind of general use in humans, you have a trade-off to make because you have an expected therapeutic benefit, but you also have to be mindful of potential side effects, particularly serious side effects and how much tolerance you have for those versus the good that the drug is supposed to do.And achieving that balance is one of the big challenges that's faced in drug development.Parmvir: So what you do really, it kind of comes at the end of the whole process of clinical trials and so on for given products, right? David: It actually starts right at the beginning of clinical development.So. Parmvir: Oh, hang on, I have to ask David's question: does that make you a Pharmacovigilante? David: [David and Parmvir laugh] I've often wondered the same thing myself. But yeah, so pharmacovigilance takes off really where toxicology leaves. So before you can put a drug into clinical development, by which I mean development in humans, drugs first have to go through preclinical development and that's where all the various toxicology studies are run.Parmvir: Can you quickly define toxicology for us? David: Sure. It is really focusing on the well, the potentially toxic side of medicines. So before you put a drug anywhere near a human, you want to be absolutely certain that it doesn't cause various catastrophic side effects in humans.So, for example, you need to be confident that it doesn't cause cancer. You need to be confident that it's not gonna cause a heart attack immediately, or cause a stroke immediately or things like that. So as per regulations in pretty much every country in the world, before you put a drug anywhere near a human in a clinical trial, it has to go through a standard set of tests.And there's various ways to achieve that. You know, sometimes those are tests using computer simulated models. Sometimes they are using individual cells or cultured cells or tissues. And sometimes as is well known in the industry they're using animal models and these are legally required tests.So every drug that goes through the process has to go through these. So that's done before it gets to clinical development. And then you start with phase one clinical trials which are studies on, usually on healthy volunteers and they're very small trials. They involve perhaps a few tens of patients. And the only purpose of those trials is to look at the safety and tolerability of the drug. So this is the first time you're putting the drug into humans. There is a bit of an exception to that. So although these are usually conducted on healthy volunteers, for some drugs, including, for example oncology drugs. Those drugs are usually along the more kind of toxic end of agents, so it's not ethical to put those into healthy volunteers. So sometimes those studies are conducted in a patient population. So once a drug moves into human studies into phase one, from that point, really for the rest of the lifetime of that drug as a human medicine pharmacovigilance is involved. So all the way through the phase one, two and three studies and then once the drug goes onto the market, pharmacovigilance continues.So the companies or the pharmaceutical or biotech companies that are developing these assets have a legal requirement to collect and analyze this data on an ongoing basis pretty much forever. Until that drug is eventually, perhaps if it's lucky enough to get to the market, until it's withdrawn from the market, perhaps many decades later.Parmvir: Very good. And I think that there are probably some very topical things that have come up recently as a result of COVID 19, which is important to consider when we're talking about these things, in that we are not just relying on these clinical trials that have gone out to ensure that these things are safe, but once they're out there that you have to continue to get feedback from people who are taking these to ensure that they continue to be safe in the long term, right?David: That's true. So, you know, ordinarily in clinical development, once you get through phase 1, 2, 3, and if you are lucky enough to have a drug, which is sufficiently efficacious, tolerable to go to market, then yes, you know, the drug's released to market and you continue to monitor for this stuff.Vaccines are in a particularly special category because they are drugs that are given to healthy people. Mm yes. And so therefore the benefit risk balance is more complicated in some ways, because , you know, it's, it's hard to consider the benefit to the individual of taking a product when they don't yet have that disease.So now there are other drugs that are in a similar category, other drugs that are given to healthy people. This is where I can ask you some questions. So what, what do you think those other drugs include? Parmvir: Oh, goodness. Um, I'm trying to think off the top of my head, what they might be. David: Yeah. It's very unfair. Parmvir: All I can think of at the moment are the other vaccines. David: Okay. So, Parmvir: but there are lots of prophylactic things. Yeah. Yeah. I can't think of anything David: Contraceptives. Parmvir: The obvious prophylactic. Yes. David: Drugs used for travel. So things like anti-malaria tablets. Parmvir: Oh yeah. David: Drugs used for things like smoking cessation Parmvir: mm-hmmDavid: stuff like that.So again, these are all drugs that are generally given to healthy people. So, you know, and this is where benefit risk balance comes into sharp focus, because if you have a drug that has been developed to treat a very hard to treat cancer, let's say, then when you consider benefit risk balance you know, if these patients are effectively going to die without a treatment, and this is the only treatment available, you might be able to accept that a drug has a one in a hundred chance of causing a fatal stroke. Particularly if that drug is given in hospital and these things can be, can be managed. If however, you are developing a cough medicine, then your tolerance for any type of dangerous side effects is basically zero, and of course, many drugs elsewhere on that scale. So yeah, benefit risk balance is a key part of what has to be looked at during drug development. And yeah, as we say, vaccines are particularly challenging. Often these days when a new drug is developed the clinical development and the studies don't stop necessarily when the drug is released for marketing. So, often as a condition of the marketing authorizations that are granted for these drugs, there have to be continuing studies to look at safety. These are called post-authorization safety studies. And so there's ongoing collection of data in a rigorous way to keep monitoring for various things. Either new things that we didn't know about the drug before, because of course when you're in clinical development, your number of patients is normally quite small Parmvir: mm-hmm David: so you're less likely to spot very rare side effects. You wouldn't usually detect a one in 50,000 probability side effect in a clinical trial cohort. Parmvir: Yeah. David: But sometimes these post authorization safety studies allow you to pick up more of that and enable you to characterize some of the side effects that you do know about more in detail.Parmvir: Yeah. So David B here asks essentially how long do these things go on after the drug's been on the market? For example, is there still pharmacovigilance for aspirin? David: Yes. Every single drug that has a marketing authorization out there it is the law in pretty much every country in the world that all safety data that becomes available to the marketing authorization holders, that's the company that owns the rights to the drug and effectively sells the drug, they're required by law to collect process, analyze and report this data. Now as drugs age, the natural reporting rate for some of these drugs drops so the probability of a physician or a pharmacist or a nurse, or even a patient reporting a side effect probably drops over time because theses are not new medicines anymore, but even so, any data that is collected has to go through that process, which is the pharmacovigilance that we were referring to earlier. In addition to that, all companies with marketing authorizations have to look at scientific and medical literature. It all has to be reviewed, so in European requirements, including the UK on a weekly basis, companies have to trawl some of the big literature databases, such as PubMed and M base, they have to trawl that information for any articles on their drugs. And any indication of side effects or other similar challenges. Parmvir: So how is this information collected and processed? Cause you've said obviously doctors, nurses, patients, they will all report certain things. Mm-hmm how do you kind of get them to a central place and cataloged and how do you decide what are actual side effects versus David: So if we think about the front end of the process, most pharma companies out there will have medical information help lines. So these are help lines that are set out there so that healthcare professionals. So that's the physicians, the, the pharmacists, the nurses and others but also consumers can contact the company for more information about the medicine and also potentially report adverse events, side effects. In parallel to that the same thing's going on with the regulators. So in the UK, for example, we have the yellow card scheme, which these days is a web portal system where anyone can go in and report side effects of medicines they're taking. In the us, you have the MedWatch scheme, which is very similar. Most companies around the world have similar things. Plus you've also got ongoing clinical trials, clinical studies, so data is coming in that way too. We've got data coming in from literature that I've mentioned. The regulators, when they receive stuff directly, they often pass that information over to the pharma company.So essentially all this information is coming towards the pharma company. It all gets directed to a pharmacovigilance department. And then we go through the process of processing that data. And so that data comes in from everywhere around the world where the drug is available for patients to take both in clinical trials and on the market.So the process basically consists of firstly translating the data, if it needs to be translated that gets captured into a safety database and there are various commercial safe databases out there. This is where companies collate all the information received on their drugs. And it goes through a process whereby data is kind of standardized it's put into standard terminology in a way that is compatible with the regulatory requirements. A narrative is constructed. So we write a story of what's happened to the patient from beginning to end. We look at various things like if the information is available to us, you know, what other medications were the patients taking? What's their medical history? What was the sequence of events? So what was the time to onset if possible, if we have that information between the patient taking the drug and them reporting the side effect, what the clinical course of the side effect was, so did the patient recover? Was any adjustment made to the the, the dosing or any treatments given? And so all that gets written up, we then decide what other information do we need to know?And then there's a feedback loop to go and ask the reporter if they'll provide additional information. Usually we ask for more information on more serious adverse events. We don't wanna overburden the reporters. Now reporters in clinical trials, so physicians involved in those, they're legally obliged to help with that process. Spontaneous reporters that we refer to, which is just where any healthcare professional or consumer contacts, the company, that's a voluntary reporting system, so we can ask them for additional information, they don't have to provide it, but we have to ask the questions anyway. So the information gets pulled together. It then goes, usually goes through a medical review, so we have kind of scientists pulling the data together. And then we have physicians reviewing the case, making sure it makes medical sense. And then depending on the seriousness of the case and other attributes, that case might have to be reported out to regulators worldwide.And a lot of the reports which are serious, have to be reported out within 15 days of what we call day zero, which is the first day anyone in the company became aware of the report. Parmvir: Mm-hmm. David: But to give you an idea, the large pharma companies are dealing with potentially tens of thousands of reports a week that are coming in on all of their products. So these are vast systems that are set up and they have to be set up to be able to meet all of the regulatory requirements in terms of timelines, for reporting. So the data's coming in, the expedited reports are going out in the format that the regulators require. We also have to pull together what we call aggregate reports. So these aggregated analyses of data over time for newer drugs, for example, those are submitted in Europe every six months. And then over time as the drug gets older, the gap between reports gets longer. And then also we're doing something, what we call signal section, which is where we are analyzing the data. And we're looking for trends in the data. Where we think we've got patterns we're starting to then look into researching those patterns a little bit more, you know, if we start to see, for example that I don't know that we are getting what appears to be a disproportionate number of nose bleeds, let's say, in a patient cohort, we would, you know, do background research on, well, you know, is there a plausible biological mechanism that we know about through the development of the drug? Was there stuff seen in the animal studies or even the human studies that might indicate that there's a, there's a root cause here.We'll look into confounding effects. Are all these patients on other drugs, which actually are likely causing that? And yeah, so kind of an appraisal is done: what's going on? Is it likely to be caused by something else? And if not, you know, we, keep on looking and those conversations then have to be shared with the regulatory authorities.And over time, what you'll see is the labeling of the product, the professional labeling which in Europe, including the UK, is the SMPC, the summary of product characteristics, which is a bit like the instruction manual for the product, which is available to healthcare professionals and the simplified version of that PIL those little leaflets you find inside of packs, those eventually get revised on an ongoing basis to accommodate the new knowledge that we are gaining on the side effect profile of the drug. So this is an ongoing process and it happens throughout the entire lifetime of the, of the drug. Parmvir: But yeah, so here's a subject that no one's talked about for a little while. COVID 19 David: mm-hmm Parmvir: [laughs] Obviously I know there's probably a collective groan from people listening right now, but it seems like a relevant subject, given the conversations around safety that people are having with regard to the vaccine. So do you know if there's been like a major uptick in these reports by individuals, of side effects from the vaccines, or do you take account of the fact that so many billions of people essentially at this point have received at least one shot of the vaccine versus how many reports you get coming in?David: Yeah. So this is one of the big challenges, and one of the things I should have said about drugs like vaccines is because they're given to such vast numbers of people, it becomes a particular challenge to differentiate between things which are being caused potentially by the vaccine and other things, which unfortunately are just bad luck of being a human being.And by that, I mean, so years ago when I was doing one of the academic courses we were being taught about the vast amounts of research that had to be done in terms of epidemiology before the HPV vaccines were released. So these vaccines were being released for use in teenage girls, and at the time it was felt that there was perhaps an insufficient understanding of the general health of that population, including things like what is the probability of a freak occurrence that a teenage girl is going to have a stroke or something like that? Things which we think of as of course, they're exceptionally rare, but they do happen.Parmvir: Mm-hmm David: and I'm talking about in untreated populations. Parmvir: Yep. David: But of course, you know, some of these patients are also on birth control and things like that, that also have other risk factors associated with them so my understanding is before the HPV vaccines were released, a huge amount of epidemiology research was done so that when the new vaccines were released, we knew that we would expect, and I'm just gonna make up a number here that, you know, one in 500,000 teenage girls would have, I don't know, some kind of fatal event which would just naturally occur, you know, even without them having the vaccine. And so that's similar for other vaccine rollouts as well. There has to be a good understanding of the background events of other things that, people will have happen to them, which have nothing to do with the medicine that you are giving.So, you know, that data is kept available and kept an eye on by the regulatory authorities and also the pharma companies. We don't have background rates for everything, so being prepared for what might come and then, you know, there perhaps isn't so much panic when the first case comes in of a patient that has one of these catastrophic events but if you start to see more than that, that's when you start to perhaps get more interested in: is this really being caused by the vaccine or the drug of interest. So, yeah, a lot of upfront work has to be done before you even put the drug out there. I mean, in terms of the COVID vaccines and the treatments, because of the high degree of public interest and scrutiny a lot of these drugs when they were first given and the vaccines were first given, so adverse events, side effects were tracked through post-authorization safety studies. So actually a lot of people, when they got their first doses, consented to have maybe a follow up call from an investigator who would ask them about various side effects that happened. So in addition to all of the natural spontaneous reporting that was coming in, there were very large cohorts of past study data coming in which is a robust way to look at these things. I know as well, there were legitimate questions about, you know, the COVID vaccines in particular were produced fairly quickly compared to the usual 10 to 15 years in development of, of a product. But you know, there are various reasons for this. So vaccines are perhaps one of the medicines where it's more possible to template out the product and therefore switch out components. But they still have a product which is similar to other products that have previously been used. But also, the COVID era in terms of vaccine development and treatment development was, in my opinion at least a completely unique event in terms of drug development so far. If you think of drug development as a kind of universe, or I'm gonna use some wonky analogies here, but let's say as galaxies, which have solar systems within them that have planets within them.So if you think of the galaxy of drug development you have all of these different stakeholders involved. You have the pharmaceutical companies and biotech companies and the service companies that support them, that's one area. You have the regulatory authorities but you have many other stakeholders.You have patients, of course they're the most important. For chronic diseases you might have patient advocacy groups. But also, you know, you guys are part of this universe as well, because you are the ones doing basic research, which is the foundation on which all, you know, all of this is, is ultimately built. So you have universities and other research organizations. You have the funding bodies that sit behind those that decide where the research money goes. And then out the other end of the process you have ethics committees that are involved in approving clinical trials. You have payers. So these are the organizations that ultimately pay for medicinal products in the UK, for example, that's the NHS. Parmvir: Yep. David: In the US, that would be insurance companies. Parmvir: Yeah. David: You have many other stakeholders. So you have obviously healthcare professionals at the end of the day, new drugs have to be woven into the fabric of medicine. And so you have to bring HCPs along with you. There are the learning bodies as well in relation to HCPs, the kind of professional bodies.So that's really at a kind of galaxy level, these are all the different solar systems. And then within them, if you look at the pharmaceutical biotechnology and service provider solar system, within those you have an incredibly complicated set of different skills departments, functions, you have the functions that are doing discovery.So these are the early days of, development where, you know, biologists and chemists are working out, you know, what are the new therapeutic targets we can look at? Then you have the clinical development division. You have the patent divisions, you have the regulatory affairs functions. You have the pharmacovigilance functions. You have the medical affairs functions, you have the medical information functions [Parmvir cackles]. There are, and I'm going to miss out many, many. You have the, the bio stats folks, you have the medical writers. And then of course you have the manufacturing, which is in itself a completely different, you know, specialized world.So yeah, you're dealing with a very complicated process with lots of things which are interlinked. But for me, if you think of all these things, like if you use layout or different compass, let's say, and I'm talking about the compass you use to check direction, not the ones you used to draw circles [Parmvir laughs] and if you scatter them all out they'll all be pointing at different directions. You know, all of these different entities have their own priorities. Because of course the industry as a whole is developing many different medicinal products for different reasons. I think when COVID came along, it was like drawing a magnet across the top of all those compasses and it got all the needles to point in the same direction.So you had governments who had a clear incentive to try and support the development of treatments. So you had governments putting up money, which was perhaps slightly unusual. They were putting money into basic research, such as the type of stuff that you guys do. They were putting money into diagnostics, which are critical for things like COVID.They were putting money into the development of vaccines and into treatments. And then of course, you know, you have the pharma companies where there was a scramble to try and develop something, to help humanity in its hour of need. You had the regulators with a lot of focus on them you know, and everyone watching their, every move and trying to ensure that you know, as many processes that often might take months, or perhaps even years were made as efficient as possible.Parmvir: Mm-hmm David: And it was a unique point in time because everyone was lined up with the same objective. So it meant, for example, that, you know, parts of the industry, which are normally a nine to five job, became a 24/7 job. Parmvir: Yeah. David: For a short period of time.And there was a huge amount of collaboration, which happened between the different stakeholder groups, you know regulatory authorities offered perhaps free scientific advice to companies that were developing this stuff. They met very regularly with companies that were in development. They gave a lot of advice as to what their expectations were when the data was received by them. They shortened some administrative pathways let's say which usually take a lot of time. They prioritized resource. So there's resource specifically waiting for this data to come in. And so, yeah, a lot of normal processes were adapted so that things could be done as efficiently as possible.And the outcome was that, you know, these drugs went through the entire process in a much more efficient way than would usually be encountered. I think another thing as well is with things like vaccines, the side effects that we anticipate to see, including the rare unusual ones ordinarily these manifest within, you know, days or weeks.It's not something that usually we anticipate things to occur years later. So there was that aspect too, but yeah, it was a, it was a unique time. Parmvir: Yeah. And actually this is a good throwback to Dr. Carina Rodriguez's podcast because she ran one of the clinical trials for the vaccine in children at USF where I work.David: Oh, fascinating. Parmvir: Yeah, so she talked about some of the things that you mentioned as well. David: I should say I was not involved sadly in any of the COVID vaccine development, but you know, it was fascinating to watch and actually to see my profession become a talking point in the news every day. Parmvir: Yes. David: It was very interesting to see all of this play out.Parmvir: Yeah. So actually, that's probably a good point to pause and ask you, what do you actually do? David: Okay. So [everyone laughs]. So as I've kind of indicated the process of pulling in adverse event data of coding it, which is the term we use for tidying up all of the data, putting it into a safety database, writing those narratives, getting the medical review, getting the important cases out the other end to the regulators, writing the reports, doing the signal section.These are very complicated processes and every company will develop them slightly differently. You know, small biotech companies, they might only have one product. It might only be approved in one or two countries. A top five pharma company will have hundreds of products authorized in many countries around the world. But all of these processes are put together in compliance with extremely strict regulations. Regulations that as I said exist in almost every country in the world and actually the regulations kind of cross over in the sense of, if you have a product that's authorized for marketing in the UK and the US, for example you know, the UK requires you to collect all the data and analyze it as does the US.They also require you to collect the data from each other's territories so companies are in the middle of the very complicated regulatory framework, which is a little bit different in each country, but fortunately is harmonized through some international bodies and international terminology. But building pharmacovigilance systems is complicated and it has to be done right. Firstly, for the obvious reason that we want to protect patients it's in no one's interest that that that patients are not protected. But also, you know, the penalties for not complying with these complex regulatory requirements are severe. And so my job really, as a, let's say senior leader within a pharmacovigilance department is to make sure that we build the right structures.And for these companies that we that we keep an eye out on all the areas, which are potential challenges and that companies are being compliant with the legislation to which we're all held. And so, so yeah, so building pharmacovigilance systems, I think is the simplest way I can describe it.Parmvir: It sounds pretty heavy and pretty complicated. David: Yeah. I mean, if you look at the larger pharma companies, if you add up all of the resource that they put into pharmacovigilance that they're legally required to put into pharmacovigilance, to service the needs of their products. A lot of things are outsourced these days, if you the count everything that comes from the outsourcing organizations as well, the big pharma companies have thousands of people like me involved in the processing and analysis of this data. So it is a big area, and that is all we do. You know, we are not involved in any other aspect of the drug. Not involved in the sales and marketing, for example, with the product, that's almost the complete opposite side of the company to us, all we do is you know, work in this very professionalized, very standardized discipline, which is pharmacovigilance. Parmvir: So David has a couple of questions. So first one should be relatively quick, which is that, is there a regulatory authority that is the gold standard? David: [David laughs] This is a very politically sensitive one.There are certainly some regulatory authorities who, particularly in some of the larger markets who are let's say more prominent. So examples would be the US FDA, the food and drug administration that is the drug regulatory authority for the United States. In the UK, we also have an extremely prominent regulator, the MHRA they're one of the oldest regulators, I believe in the world. So that's the UK medicines and healthcare products, regulatory agency. But you know, every country has its own regulator and whilst there are some who put themselves out there, perhaps as world leading regulators, there are just as many others that are doing the same important job for their countries. The European Union and European Economic Area has a slightly more complicated system because they have a coordinating regulatory authority, which is the European Medicines agency, the EMA, who many of you all have heard about in news reports, particularly during the COVID situation. But at a national level, you also have all of the national regulators who are working in tandem with the EMA. Parmvir: Okay. So this sounds quite different from, obviously it's very different from what you were doing during your PhD. David: Yes. Parmvir: He also wants to know, how did your PhD work, prepare you to do what you do now. David: If I could sum it up in one phrase, and this is a phrase which is overused, but I think in this case, it is really true: problem solving.Parmvir: Mm-hmm David: because it's interesting, you mentioned earlier that you and I we're almost engineers. Well, I went from becoming a physical engineer, at least in a lab environment to a process engineer. And, you know, I always used to think very naively when I was doing the basic research with you, I used to think, look, we are solving problems that no one knows the answer to. This must be the hardest job in the world. [Parmvir laughs] We're not solving manmade problems. Manmade problems must be so easy to solve. But no manmade problems [Parmvir laughs] are also particularly challenging. And when I say manmade problems, you know, I'm not talking about problems that someone is deliberately created, it's just, you know, logistical challenges, and just the challenges caused by working in, you know, different regulatory envionments with different sets of requirements and how to build processes that meet all of the requirements at the same time. And react to events, of course, because it might well be that you've had a product that has been ticking along nicely for a long time. And then suddenly there is a safety concern with the product. And if that safety concern is in the public domain, you will be deluged with reports in relation to that product called stimulated reporting. And you know, of course sometimes companies will be subject to class action lawsuits particularly in the US. So they might also receive large volumes of reports all in one go. All of those reports have to meet the same legal timelines, but now suddenly you've got 10,000 reports landed on your desk. Each one takes four hours to process and they're all due to the regulators in 15 days. So yeah, it is challenging working in a hyper regulated environment. Parmvir: Essentially these are problems that come about because we are humans. David: Exactly. Yeah. Parmvir: And we have to somehow live together. David: Yeah. Parmvir: So I had a couple of questions from my little sister and these might not be directly related to your work, but they are related to the fact that you work within an environment that involves clinical trials and patients and so on.And so Sukhy wants to know are side effects from drugs, usually the same for healthy people versus patients. David: This is a great question and cause me a little bit of head scratching. I think, I mean, the answer is it depends, I think by and large. Yes. But there will be some exceptions and those exceptions include things like some of the oncology treatments, because obviously there is an interaction often between the drug and the tumor, for example, so in a healthy person you can't emulate that because there is no tumor. So an example would be a phenomenon called tumorlysis syndrome which can only occur when there's a tumor to react to the particular drug. But by and large, yes, we extrapolate safety data from healthy individuals initially, which is why the earlier phases of studies are done often in healthy volunteers with some exceptions. But yeah. Then when we move on to phase two and then phase three, phase two and three are conducted in patients that have the indication of interest, I have the disease that we're trying to treat.Parmvir: So another question she had: how do you know people who are not healthy will be able to tolerate the drugs given that initially that they're tested on healthy people?David: So the first thing I would say is I'm not an expert in the design of clinical trials, but as I said, as you go through phase one which are the trials that are normally on healthy patients, you actually start out with a tiny, tiny dose. So you have an idea of dosing from your animal studies, but the data isn't always transferrable. But you take the maximum tolerable dose in animals, including in the most sensitive animals. And you then cut that by huge factor by perhaps 500 fold. Parmvir: Right. David: So you start out with a tiny amount and then you escalate up the doses to see how the patients are tolerating the drug, not the patients subject, I should say. So these are healthy volunteers usually. Parmvir: Yep. David: So that's phase one, but yeah, then of course, when you go into phase two, you're dealing with a different patient population. I don't know exactly how that's always done, but of course, you know, trials are put together by experts in the field. And they involve, you clinicians whose expertise is this particular area of medicine.Parmvir: Yeah. David: And of course it's not just the physicians at the pharmaceutical company and the biopharma company and the scientists, I should say as well. Also, this stuff is going to regulatory authorities, it's going to ethics committees, all of whom will have their own areas of expertise. So, you know, protocols are designed around the patient and to ensure the patients are not put at unnecessary risk.Parmvir: Ah, sometimes David sends me one of those questions that really makes me giggle. And this is if regulations are so important and onerous, how do I start my own biotech in the garage? David: [David laughs] Well, it's interesting, you know, companies don't necessarily have to be that big themselves to get started, but what they will need is a lot of help.Parmvir: Yeah. David: So what you'll see these days is you know, new biotechs starting up. But they rely very heavily on outsourcing. So they will partner with service providers with contract research organizations, with contract manufacturing organizations, all sorts of other parties that have the expertise that perhaps they aren't able to pull together themselves.But yeah, there are some companies out there, particularly smaller companies in earlier development that are, you know, pretty small might have 20 people in the company. Parmvir: Yeah. David: But they will need to rely on the help of many others, because going back to the kind of universe description that I gave, you know, there are so many specialized areas that you need to have covered in order to pull together everything you need, both to run a clinical trial. and also to submit a marketing authorization application. And then also keep your product compliant with all of the legal requirements that are out there.Parmvir: It's a lot.David: It is a lot, and you know this is why drug development is so costly because it needs a truly vast number of specialists involved. And, you know, quite a lot of physicians as well. And also, you know, most drugs that enter drug development don't make it all the way through the other end, so the end costs of medicinal products also have to cover the cost of the drugs that didn't make it.And plus companies only have a certain period of exclusivity before their drug becomes generic, i.e., other companies can start making it. Parmvir: So this is purely from a personal perspective, from your point of view: what do you think about the fact that obviously you have these companies who have put so much money developing these things, which were designed to treat a global pandemic. And yet we found that for example, like entire continents, like Africa still don't have a lot of people vaccinated against COVID 19, and those companies will refuse to open up the patents to allow them to be able to get people to stay healthy. David: Yeah, it's an area that really I'm not really sufficiently qualified to talk on. And I'm not just saying that, you know, through not wanting to put my foot in my mouth, but particularly with some of the vaccine technologies that were used, they were not simple medicines to manufacture. So not simple to manufacture, not simple to store, not simple to distribute. And sometimes I guess, it is perhaps a legitimate concern of a company that if other companies start making their same drug to a lower quality, that can have ramifications elsewhere. Now I'm not saying that that was the reason behind some of what you mentioned. Now there was a vaccine that was developed the UK vaccine which was specifically developed from the outset to be made available in developing world countries, let's say, and specifically to be made available at cost. And even the way that product was designed, it can be manufactured and stored at fridge temperature Parmvir: mm-hmm, which is a big deal. David: Exactly. It is a big deal, you know, those are all very important components to consider. A vaccine that could be used in those environments. But even, I remember because I vacuumed up all of the documentaries I think on television, Netflix, everywhere else about all of the challenges that were being faced. And, you know, there were even things that you just wouldn't think about, which was, you know, because the mRNA vaccines had to be stored at -80 [degrees Celsius], there wasn't enough minus 80 freezers in the developed countries, let alone figuring out how to develop and ship these to other countries with different climatic conditions.And so you even had the manufacturers of that type of equipment, having to up their game and suddenly churn out much more equipment than they previously had. So, yeah, there's no simple answer. I mean, historically there've been other challenges in the past with other types of drugs, such as the HIV medications. In the end access to those drugs was resolved through very careful dialogue between companies, regulators others. Access issues, I believe to those drugs, and again, this is just basically what I see on documentaries and other things; where are access problems these days, they're not in relation to the drug supply chain they're in relation to other things like people not wanting to come forward and receive treatment because of the stigma associated with things like that.Parmvir: So in short, do you enjoy your work? David: I do. I mean, I can honestly say that in my work every day is different. I'm very privileged in my job to support a number of different companies that are developing different products with a very wide variety of indications. And also, you know, just when you think you've seen it all worked with a wide variety of medicinal products, suddenly something completely new will come along. For example, we are now on the precipice of many commercial gene therapies coming out. Parmvir: Ooh. David: And you know, those products have some different considerations. Perhaps some of these interventions are irreversible Parmvir: mm-hmm.David: So, you know, what happens if patients do start developing something rare and unexpected. You have patients surviving a lot longer than was originally envisaged so, you know, are there other things which come about you know, as a result of the underlying disease that just no one had ever seen before. And yeah, many other types of technologies and the regulations are always having to evolve to take into account of these new therapies and the challenges associated with them.Parmvir: Well, it sounds like you will continue to live in interesting times. David: Yeah. I don't think I'm going anywhere anytime soon . Parmvir: Well, thank you so much for your time today, David. That was fantastic. And yeah, as I say, we kind of thought of you as soon as we started thinking about the safety surrounding things like COVID vaccines and knew that was your jam.So yes, we very much appreciate your time today. David: Okay. Thank you very much. [musical interlude]David: So I mentioned earlier that at an early point in my PhD, I switched to studying vascular endothelial cells that were harvested from pigs. So essentially these were pigs that were being slaughtered for the meat industry. And so I had to look through a phone book and identify an abattoir that I could go to and get the tissue that I needed to do my experiments so obviously this all had to start somewhere. So I put in a call to an abattoir in deepest, darkest Essex. And I gingerly made my way on the train to this place, which of course was in the middle of rural nowhere. And unfortunately the first day that I picked to go, it was snowing. Now we don't get vast amounts of snow in Southern England, but this was a decent sprinkling of snow. So I arrived in this quiet rural destination and I walked across various fields. I think I'd perhaps just got GPS on my phone, but it was very early days. And I was lost in fields of white in no time at all. So I ended up putting in a call to, the guys, to, come and pick me up, which they very kindly did. So then, you know, at that time I really didn't know what a coronary artery looked like so what I decided to do for that first trip was I just collected the fresh hearts that they were able to bring out the processing facility. So these were kind of warm pig hearts, freshly harvested from animals. I think I had three hearts or something like that. And so I had a large polystyrene box with me with some ice in it. And I think they were kind enough to give me the ice, as I put these hearts inside bags and put them in the box and then started making my way back to London. And of course, you know, this being a cold day, the heating was on, on the train, and so as I was sat on the train, in fact, I think it was when I got onto the tube, I suddenly became horrified that my polystyrene box was starting to leak water. And of course I knew, but no one else knew on the tube that within that water were bags, perhaps not secured, very tightly containing hearts and containing probably a fair amount of blood.And I suddenly started sweating that this puddle that was starting to pull around my polystyrene box on the floor of the tube would suddenly start to go pink and then red. And then before I knew it, I would be in serious trouble. So it was just one of those situations where the tube journey seemed to get longer and longer, and I was sweating more and more and then it got to the point where I felt that I couldn't wait any longer, so I kind of dashed outta the tube at the next station went up what was perhaps one of the longest escalators on the underground and managed to just get out the other side before I caused perhaps a fake terrorist incident or something like that. I was trying to think about how I would explain that I'd got three hearts in my polystyrene box and a set of scalpels bearing in mind that pig's hearts are very similar size to human hearts as well. So, yes, I managed just about to get to the lab. I clearly looked quite distressed, I suppose when I got back to the lab. So I started telling this story to my PhD supervisor, Dennis, and uh a retired professor that had come into the department, Don. And before too long, the two of them were crying with laughter at my story.So, um, so yeah, so that was my very first trip and yes, never, never forgotten.[musical outro]David: Our lab, when we first joined, it was quite old and a bit dog eared. And there was one particular chair in the office, which was, I mean, it was like a typical office swivel chair, but it had definitely seen better days and it was extremely uncomfortable. And when we had lab meetings, no one wanted to sit on this chair. And so Parmvir and I nicknamed it, Beelzebub's stool.

    The salamander scientist

    Play Episode Listen Later Oct 9, 2022 55:37


    He conserves wild spaces, he climbs tall trees, he records flying amphibians. He is: Christian Brown – the Salamander Scientist! We talked about his graduate research involving dropping salamanders in a wind tunnel, watching hours of recordings to get his data, and his work outside the lab to save a local forest preserve.

    The ambassador for microfluidics

    Play Episode Listen Later Jul 24, 2022 50:18


    Microfluidics is, as the name might imply, the study of small amounts of liquid. Now this may not sound super exciting until you hear Dr. Éadaoin Carthy talking about her field.

    Serendipity in chemistry

    Play Episode Listen Later Jun 25, 2022 60:20


    Chemistry and chemicals get a bad rap, but unfairly so. Certainly that's the view of AP De Silva, someone who fell in love with the subject in his native Sri Lanka and who has continued a fruitful career in Northern Ireland. We talked with him about his humble origins, the serendipity of moving to Queen's University, Belfast and the spiritual side of understanding molecules. We also learned about the life of someone who has experienced civil wars in two different countries, and how his work may have had life-saving impacts, all thanks to a tiny device with 6 little dots.

    The Patient Doctor

    Play Episode Listen Later May 27, 2022 54:39


    That a doctor listens to their patients should not be a surprise, but that they use information from their patients to help improve care may well be. Enter Dr. Jason Wilson an emergency physician, a graduate trained anthropologist and a man with his finger on the pulse of many projects.

    Piensa en los niños

    Play Episode Listen Later May 7, 2022 31:08


    So with much fanfare, we launch our accompanying podcast 2Cientificos in Spanish! You'll be able to find all future episodes on our new dedicated page, but for the bilingual among you, this is one to enjoy here and now. La Dra. Carina Rodríguez ha empaquetado sus estudios de medicina que adquirió en su país de origen, Argentina, y se los ha llevado a los EE. UU. Tiene experiencia en una amplia gama de enfermedades, como por ejemplo: especialista en enfermedades infecciosas pediátricas, pero su atención se ha centrado en los más pequeños.

    Winning Webbys and Science in Spanish

    Play Episode Listen Later Apr 15, 2022 2:28


    Vote for us in the Webbys!

    This one's for the kids

    Play Episode Listen Later Mar 31, 2022 35:17


    Dr. Carina Rodriguez is physician-researcher who has transported her skills from her home nation of Argentina to the US. While she has experience in the prevention and treatment of a wide range of diseases, as a pediatric infectious disease specialist her focus has been on the little ones.

    The science of cancer and care

    Play Episode Listen Later Sep 7, 2021 56:16


    Dr. Brandon Blue is an oncologist and physician-scientist at Moffitt Cancer Center. As a medical doctor he spends his time treating blood cancers, so this is an apt episode for Blood Cancer Awareness Week. As a researcher though he's trying to understand more about disparities in diagnosis and treatment of such cancers so that all patients receive better care. Brandon is also a big proponent of outreach, wanting to give back to his family, friends, neighbors and other community members. Whether we're talking about holding Facebook live sessions on COVID-19 or coaching his kids' baseball team – Brandon is a firm believer in stepping up to the plate.

    Psychology, psychopathy and creating positive change

    Play Episode Listen Later Aug 31, 2021 48:39


    What happens when your psychology research just doesn't quite scratch that itch any more? Well, in the case of Prof. Edelyn Verona, it means you join with your colleagues to create a Center for Justice Research and Policy, something she is well placed to do as an expert in mental health, and violent and criminal behavior.

    NDN Science on Earth Day

    Play Episode Listen Later Aug 24, 2021 75:48


    Meet Annie Sorrell the lover of manatees, from Montana (Annie is from Montana - not the manatees). And Loga Fixico, scientist, philosopher and studier of complex systems. What do they have in common? Well, they both studied at the Center for Native Peoples and the Environment at SUNY ESF, they're cousins, and they're cohosts of the NDN Science Show. We had the great pleasure of speaking with them on Earth Day in the midst of our taste of science festival on everything from how they use their training to assist their indigenous communities, to the value of understanding culture and storytelling in informing scientific research.

    From pikas to politics

    Play Episode Listen Later Aug 17, 2021 49:08


    Prof. Nancy Huntly is the scientist who almost never was. All through high school and university she didn't feel like science was for her, but her curiosity has led her to study ecosystems as an academic, work for government agencies and more recently she's been researching how best to keep grad students in STEM programs. All that was not enough for Nancy though as she has also run for State Senate in Utah! Join us as we chat about her unique and inspiring journey from pikas to politics

    Math the vote pt II: Polls and predictions

    Play Episode Listen Later Aug 10, 2021 42:30


    While at Northwestern University, Dr. Alexandria Volkening and her colleagues developed compartmental mathematical models to predict the 2020 US elections. What's a compartmental model? How do you teach kids about math modeling using Finding Nemo? Which is better: the Parmvir poll or the Alexandria poll? We ask her about this and more.

    Math the vote pt I: The geometry of gerrymandering

    Play Episode Listen Later Aug 3, 2021 60:32


    Gerrymandering has been described as the process by which the people being elected get to chose the people that elect them. It turns out that, while many people would argue that gerrymandering is not healthy for democracy, doing it right requires some maths. Dr. Thomas Weighill is a mathematician “weighing in” to do just that.

    COVID-19 special: The Math Epidemiologist

    Play Episode Listen Later May 1, 2020 69:32


    A journey through ecology, evolution, infectious disease, mathematics and computational biology in medicine is what has made Dr. Brandon Ogbunu the scientist he is today. And he is completely unapologetic about it because Brandon’s believes that all these facets of his work, personality and ethnicity put him in a unique position to understand complex interactions. That includes those that we’re seeing in the midst of a pandemic. We had the pleasure of talking to Brandon about his writing including wired pieces on social justice and spotting experts over opportunists, and an article for ESPN’s The Undefeated. We also talked about his research, comedy and his love for science fiction.

    COVID-19 special: The Microbiologist

    Play Episode Listen Later Apr 24, 2020 83:42


    Dr James Gurney is a microbiologist interested in infectious diseases. He is also a big fan of science communication whether that means talking to students in classrooms, hosting his own podcast, or consulting for Kurzgesagt. In fact it’s the latter that inspired us to ask James on our show. You can find the Kurzgesagt on the novel coronavirus here. We talked about James’ current research, armchair scientists and naturally, COVID-19.

    COVID-19 special: The Conservation Biologist

    Play Episode Listen Later Apr 17, 2020 84:53


    Bats are a hot topic right now in light of COVID-19, but anyone working on them will tell you these are some of the most misunderstood mammals. Thankfully Dr. Susan Tsang is an expert and she sat down with us to talk about her favorite pollinators. Yes, just like the birds and the bees, we should be including bats among the organisms that help transfer seeds. Listen in, or this time watch(!) to hear more about Susan’s field of biogeography (the study of where things live), conservation, and how her science is affected by the current crisis.

    Eat the crust

    Play Episode Listen Later Apr 16, 2020 52:39


    Eat the crust? No, we’re not talking bread, we are talking about that layer of our planet earth, because our guest is geoscientist, Beth Bartel. For someone who’s worked a lot with GPS, much of Beth’s career has been pretty meandering. For now though she’s settled on a job she loves, helping communicate the science of geology and natural hazards, while training other scientists to share their work. We talked to Beth about the challenge of tackling pseudoscience, and the need for including social sciences to inform other fields of research.

    The doctor will see you now

    Play Episode Listen Later Apr 9, 2020 39:21


    Oz Ismail went from being a research scientist taking pictures of bones, to a doctoral scientist, taking pictures of brains. He spent his PhD imaging as part of a project on Alzheimer’s disease. We talked to him about what’s known about the disease and the difficulties in treatment and diagnosis. We also talked about how along the way he’s performed stand-up, worked with friends to create the Minorities in STEM community, and how he himself is co-host of a science podcast called Why aren’t you a doctor yet? Thankfully, Oz now is Dr. Ismail and currently playing up his Britishness in Portland, OR.

    The H.E.A.R.T. doctor

    Play Episode Listen Later Apr 2, 2020 54:03


    How many people knew what they wanted to do when they were 9? Sure, maybe you wanted to be a rockstar or a fire fighter, but a psychologist? Well we know one person at least! Dr. Lindsey Rodriguez is a social psychologist interested in the science underlying close relationships. As the director of Healthy Emotions and Relationship Theories (HEART) Laboratory she and her colleagues are looking for new ways to help people with difficult relationships. We talked to Lindsey about her work studying how alcohol can be harmful and helpful in romantic relationships, and how to do that in a scientific manner.

    When science gets political

    Play Episode Listen Later Mar 26, 2020 52:43


    Science, genetics, teaching and policy. Four things that easily define our guest Dr. Amy J Hawkins. She’s studied the ways that DNA can be damaged in cancer. She’s worked on curricula to help teach genetics at the Genetics Science Learning Center in Utah. She’s worked with policy makers to help improve the lives of fellow Utahans. All makes sense because science, people and politics are all connected. Find out how in this episode with Amy.

    Academic stand-up

    Play Episode Listen Later Mar 19, 2020 67:06


    Knock knock. Who’s there? Since this is the extent of our joke-telling ability, we’ll leave the real thing to the experts and one of our favorites is Kyle Marian. She began her scientific career as an anthropologist, but has since transitioned into communicating science through…comedy? Find out more about the parallels between academia and stand-up, and how Kyle uses her art as a powerful tool to include those most disenfranchised. Before we go on though, this episode contains a lot of strong language and explicit content. Now that you’ve been warned, go forth and enjoy!

    The power of words

    Play Episode Listen Later Mar 12, 2020 55:39


    What’s the shape of a word? How do you save a dying language? How is studying languages a science anyway? All excellent questions for our guest Prof. David Adger a linguist at Queen Mary University of London. He is interested in what underlies the patterns found in the grammar of human languages. Why would anyone study this? As David states, just to better understand the world. But there are also more practical applications like saving dying, often Indigenous languages which hold within them stories and knowledge that can help everyone’s understanding of the world.

    Mental health in Mandarin and modeling in Montréal

    Play Episode Listen Later Mar 5, 2020 0:46


    Julian (Zunping) Xue is an MD/PhD (so good they doctored him twice!). He’s a mathematician trying to understand evolution. Why does it set off down a certain path, but not others? He’s also a psychiatrist, in fact the only Mandarin speaking one in all of Montréal. We spoke to him about the connections between two seemingly very different fields, his work to create a network of health professionals for the local Chinese community, and his disgust for the last season of Game of Thrones.

    The eccentric nucleus

    Play Episode Listen Later Feb 27, 2020 0:43


    Ankita Patil studies mircrotubules, which as the name suggests are small tube-like structures. They can assemble and disassemble in neurons to transport things around cells. Outside of her research though, Ankita is a mentor to other women in STEM as part of the Philadelphia chapter of the Association for Women in Science. She is also the City Coordinator for taste of science in Philadelphia and in whatever time she has left, she draws cartoons, often about science.

    Same same but different

    Play Episode Listen Later Feb 20, 2020 34:50


    Despite our physical differences, humans are genetically 99.9% the same. Graduate student Renée Fonseca is fascinated by why this is, and how it is important in the case of human health. Part Colombian, part Puerto Rican and part American, Renée’s background is partly responsible for her scientific interests. We discussed her Fulbright Scholarship, outreach in research and the importance of respecting local communities. We also talked to her about her local advocacy.

    Breathing and bugs and biofilms...Oh my!

    Play Episode Listen Later Feb 13, 2020 34:50


    Bugs of a biofilm flock together, or so says Dr. Sophie Darch. Sophie and her lab study how bacteria interact with each other. She’s interested in what these interactions mean for chronic infections in diseases like Cystic Fibrosis. We talk about her journey through science, moving from the UK to the US, and “basic” research.

    Stem by name, stem by nature

    Play Episode Listen Later Apr 10, 2019 43:00


    She enjoys STEM advocacy, she works on stem cells, she is: Dr. Kristi Stemler. While she works at MD Anderson, she isn’t a cancer researcher. Rather she looks at the role of stem cells and diet in making cancer sufferer’s lives more comfortable. We talked to Kristi about being a first generation college graduate, an artist and thrower of sharp implements! This episode also features a guest appearance from cancer scientist, Stanford postdoc, and our SF taste of science coordinator: Saumyaa.

    23 and them

    Play Episode Listen Later Apr 3, 2019 52:00


    In the immortal words of Jeff Goldblum (well, his character anyway) “Your scientists were so preoccupied with whether or not they could, they didn’t stop to think if they should.” This feels like a recurring theme in today’s world of technology that has the power to change our very DNA. Enter Dr. Katherine Drabiak, a doctor of jurisprudence and a bioethical scholar. What are our rights once we spit in a tube for 23 and me? How do we decide when science is being done for the greater good or just for profit? These are the kind of questions Katherine has considered in the course of her work.

    What a scientist looks like

    Play Episode Listen Later Mar 27, 2019 53:35


    Picture a scientist. Do you see the typical white lab coat, and a researcher trying to cure diseases? Who do you consider to be a scientist? Could it be a teacher? A girl scout leader? A comedienne? Our friend Ana Zambrana, says yes to all of the above. Whether talking to school children, or delivering monologues, Ana keeps those scientific principles in mind. Find out more about her outreach activities with Bardo Científico, or follow her antics on Twitter.

    Science out in the open

    Play Episode Listen Later Mar 21, 2019 53:35


    Anson Mackay studies the effects of climate change on freshwater ecosystems. His work often takes him way out to areas like Lake Baikal in Siberia, but openness in his work is not limited to geography. He understands his privilege as a white male professor at a prestigious university. He is an advocate for more open access to scientific information. He also supports efforts for gender equality, increased diversity and inclusion of ethnic minorities and the LGBTQ community. Don’t believe us? Check out his Twitter!

    Statistically speaking

    Play Episode Listen Later Mar 13, 2019 39:50


    Ask the average scientist about statistics and watch them squirm. Not Dr. Karen Lamb though, she loves applying her training to real life problems. We met up with her in Melbourne to talk stats, scicomm and Superstars of STEM. You can follow Karen and her adventures on Twitter.

    Stars in indigenous eyes

    Play Episode Listen Later Mar 6, 2019 52:14


    How does seeing monsters in the stars help scientists understand where ancient wildlife could be found? Much in the same way that a cultural man and astrophysicist can become friends. Australian aborigines have been telling stories for tens of thousands of years, but only now are researchers starting to find the science within them. In this story we talked to Muruwari man Willy Stevens and his scientific partner in crime Dr. Duane Hamacher.

    Dr Schaumberg (or how I learned to stop worrying and love the pill)

    Play Episode Listen Later Feb 27, 2019 38:20


    Mia Schaumberg always loved science, but she also loves exercise, so it would seem natural that she would end up as an exercise physiologist. Having received her doctorate she works as a lecturer at the University of the Sunshine Coast, whilst researching links between exercise and brain health in the ageing brain. During her PhD, though, she focused on how the contraceptive pill might affect athletic performance.

    Addiction and attachment in monogamous mammals

    Play Episode Listen Later Feb 22, 2019 30:17


    Part III of our Stanford Special. Dr. Natalie Nevárez is first generation Mexican, the first in her family to go to college, but only the second to receive a scholarship from Pornhub (yes you read that right), and she’s proud of all of these things! She talked to us about her past and present research looking at how animals form attachments, and the importance of social networks in tackling problems like addiction. Natalie also talked to us about struggling through grad school, getting therapy and her love for community colleges. You can follow her fighting the good fight on twitter.

    When brain meets machine

    Play Episode Listen Later Feb 21, 2019 23:20


    Part II of our Stanford Special. No one wants someone poking around in their head and neither does your brain. This is a puzzle for scientists like Dr. Marc Ferro, who are interested in bioelectronics. He’s trying to develop brain implants to help in conditions like Parkinson’s disease, but how to do that when the brain wants to reject them?

    The protein folding biologist: Marie Kondo of the cell

    Play Episode Listen Later Feb 20, 2019 28:19


    Part I of our Stanford Special. Dr. João Rodrigues decided early on that as much as he loved biology, he didn’t want to get his hands too dirty, so now he studies the shapes that proteins make by using computer models. He works with biologists and chemists to look at the way the proteins in our cells go from being like beaded necklaces to more complex structures to help them do what they need to do.

    The queen of oxytocin

    Play Episode Listen Later Feb 13, 2019 33:26


    Oxytocin is often touted as the “love hormone”, but it’s also the focus of neuroscientist Dr. Bianca Jones Marlin. Bianca sat down to tell us about her work on how trauma can be inherited, and how oxytocin helps the brain to adapt to caring for a newborn. Join us to hear about her experiences growing up in a unique family, how they inspired her research career and her own personal love story. Now she’s a scientist, educator and communicator, and she’s shared her work in many venues, including taste of science in NYC. You can keep up with her appearances on twitter.

    new york city oxytocin bianca jones marlin
    The storytelling geneticist

    Play Episode Listen Later Feb 6, 2019 60:48


    Dr. Kat Arney has studied genetics, written many books, recorded podcasts and now is helping other people to tell their stories through her organization First Create the Media. We chatted to her about epigenetics, our personal genomes and sharing that information with others. We talk about genetic manipulation through CRISPR, a subject Kat discussed as part of her tenure with the Naked Scientists. Just listen out for our “Uh oh” moment as we’re talking about it towards the end of this episode!

    Wait wait...Earth isn't doomed!

    Play Episode Listen Later Jan 30, 2019 84:24


    Howdy friends! We’re back with Season 6 of our podcast, but this episode is a little bit different. taste of science DC partnered with the wonderful Kasha Patel of DC Science Comedy to cover the serious subject of our planetary demise…or not! Join Kasha and her special guests Haywood Turnipseed Jr., Jessie Deichmann, Tom Di Liberto and Julie Speers as they quiz and laugh their way through all manner of questions earthy. #EarthOptimism

    The bird man

    Play Episode Listen Later Apr 16, 2018 45:47


    Chris Whelan is the bird man. From a small boy to an experienced scientist his interest hasn’t faltered. What would a world without birds look like? (A clue - think of the vultures.) Is climate change affecting how birds behave? We ask Chris all this and more, so join us to learn all about our feathered friends.

    The archeology of a "good year"

    Play Episode Listen Later Apr 9, 2018 44:18


    Davide Tanasi is a native Sicilian and specialist in specialist in Mediterranean archaeology. He reconstructs ancient villas with drones and the latest in computer imaging, and battles the odds to find that perfect vintage. The older wine is the better it is right? So a 6000 year old bottle has to be amaaaaazing! Listen in to find out all about this discovery and more. You can find his work at the USF Institute for Digital Exploration on their Facebook page where you can explore castles in Spain or the Ringling Museum in Sarasota, all from the comfort of your own home.

    The running scientist

    Play Episode Listen Later Apr 2, 2018 70:12


    John Brewer is a runner who works in science, and a scientist who studies running. We hear stories about the right kind of shoes, diet, hydration and technology but what's the evidence underlying the hype? John talks about how our bodies respond to heat, food and running barefoot, and how runners probably deserve that extra piece of pie during the holidays. We were like kids in a candy store (or rather runners in a shoe store) for this one, so forgive us the indulgence!

    The nanochemist

    Play Episode Listen Later Mar 26, 2018 40:58


    Nanotubes...nanobots...nanonachos?! Terms you may have heard but what do they mean and what do they do? We asked Maia Mombrú a graduate student in chemistry at Universidad de la República de Uruguay in Montevideo. She tells us about nanotubes in nature making butterflies bluer than blue, and in our TVs making screens brighter than bright. In her own research she is making these tiny particles to develop safer ways of delivering radiotherapies.

    Engineering the human machine

    Play Episode Listen Later Mar 19, 2018 32:33


    What do you get if you cross an engineer with a love for tiny blood vessels? Shayn Peirce-Cottler: a professor at the University of Virginia studying the role of microvasculature in disease. She's looking at how we can engineer treatments from raw materials including  fat cells from liposuction! We discuss novel technologies, Women in STEM, and midlife collaboration crises. No chinchillas were harmed in the recording of this podcast.

    Of microbes and men

    Play Episode Listen Later Mar 12, 2018 45:02


    Tara Bracken is a specialist in Infectious disease and Global Health, a champion of vaccines, a blogger and just all round great communicator of many things science. We talk to her about tackling malaria, reaching out to the vaccine hesitant and how keeps herself from just crawling under a table and hiding from bad science.

    It's the end of the world as we know it...

    Play Episode Listen Later Mar 5, 2018 40:45


    ...and we're feeling kind of queasy if we're honest. Les Shaw is a researcher at the University of South Florida and he studies the resistance of bacteria to antibiotics. Most of us have only known a world where many infections can easily be treated with readily available treatments, but the rise of resistant bugs such as MRSA is frighteningly common and threatens to become a major health issue. How did we get here, and is there hope for us in the future? Listen in to find out more.

    The original paleo diet

    Play Episode Listen Later Feb 26, 2018 42:29


    We've all heard of "The Paleo Diet", but what did our paleolithic ancestors actually eat? Well we found exactly the scientist to ask. Briana Pobiner is a paleoanthropologist whose research centers on the evolution of human diet. We discuss when and why humans started eating meat. We also had to ask her about the dream job she has at the Smithsonian National Museum of Natural History, where she helped put together the Human Origins exhibit. Listen in to hear more about education, evolution and the history behind our eating habits.

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